TRIM GALORE!

 Trim Galore! is a wrapper tool around Cutadapt and FastQC to consistently apply quality and adapter trimming to FastQ files, with some extra functionality for MspI-digested RRBS-type (Reduced Representation Bisufite-Seq) libraries.

Documentation

Usage

To see what versions of Trim Galore! are available type

module avail trim_galore

To see what other modules are needed, what commands are available and how to get additional help type

module help trim_galore

To use Trim Galore!, include a command like this in your batch script or interactive session to load the Trim Galore! module:

module load trim_galore

Be sure you also load any other modules needed, as listed by the module help trim_galore command.

 

 

 

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