Phylogenetic Analysis by Maximum Likelihood (PAML)

PAML is a package of programs for phylogenetic analyses of DNA or protein sequences using maximum likelihood

Documentation

http://abacus.gene.ucl.ac.uk/software/paml.html

 

Usage

To see what versions of PAML are available type

module avail paml

To see what other modules are needed, what commands are available and how to get additional help type

module help paml

To use PAML, include a command like this in your batch script or interactive session to load the PAML module:

module load paml

Be sure you also load any other modules needed, as listed by the module help paml command.

User Information

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Send mail to remarks@psc.edu or call the PSC hotline: 412-268-6350.