Discovar and Discovar de novo

 Discovar and Discovar de novo are gene assemblers written at the Broad Institute.   See the FAQ for a description of the difference in the two.

Documentation

• Home page at the Broad Institute
• FAQ

Usage on Bridges

To see what other modules are needed, what commands are available and how to get additional help type

module help discovar
module help discoverdenovo

 To see what versions of Discovar and Discovar de novo are available type

module avail discovar
module avail discoverdenovo

 To run Discovar or Discovar de novo, include a command like this in your batch script or interactive session to load the appropriate module:

module load discovar
module load discovardenovo

Be sure you also load any other modules needed, as listed by the module help discovar  or module help discovardenovo command.