Discovar de novo

 Discovar de novo is a gene assembler that can generate de novo assemblies for both large and small genomes. It currently does not call variants.

Documentation

• Home page at the Broad Institute
• FAQ

Usage on Bridges

To see what other modules are needed, what commands are available and how to get additional help type

module help discoverdenovo

To see what versions of Discovar de novo are available type

module avail discoverdenovo

To run Discovar de novo, include a command like this in your batch script or interactive session to load the Discovar de novo module:

module load discovardenovo

Be sure you also load any other modules needed, as listed by the module help discovardenovo command.