ALLPATHS-LG

 

ALLPATHS-LG is a short read assembler.  It is developed and supported by the Broad Institute.

Documentation

 

Usage

To see what versions of ALLPATHS-LG are available type

module avail allpaths-lg

To see what other modules are needed, what commands are available and how to get additional help type

module help allpaths-lg

To use ALLPATHS-LG, include a command like this in your batch script or interactive session to load the ALLPATHS-LG module:

module load allpaths-lg

Be sure you also load any other modules needed, as listed by the module help allpaths-lg command.

 

 

 

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