LATEST NEWS

2023: Year in Review

2023: Year in Review

2023 was another banner year for PSC, bringing awards, progress in important research areas, and a new director to PSC! We’d like to highlight just some of the newsworthy accomplishments that the year brought.

See you at SC23

See you at SC23

PSC is heading to the International Conference for High Performance Computing, Networking, Storage, and Analysis  — otherwise known simply as Supercomputing, or SC — in Denver the week of November 12th.

PSC 2023 Summer Interns

PSC 2023 Summer Interns

PSC has a longstanding tradition of providing internship opportunities to undergraduate researchers in fields related to advanced computing. This year we had seven students on board learning valuable research and technical skills for their upcoming classes and future careers.

Women’s History Month

Women’s History Month

The Pittsburgh Supercomputing Center is proud to highlight the work and life of our newest women team members for Women’s History Month

2022: Year in Review

2022: Year in Review

2022 was another stellar year at PSC! We won awards, worked with interns, welcomed new faces, and widened scientific knowledge. Here’s a look back at what 2022 brought to PSC.

Meet PSC’s Summer Interns

Meet PSC’s Summer Interns

We didn’t have to search hard to find qualified students for PSC’s Summer Internship Program. Over 100 students applied for the five available positions. Let’s meet them and find out what projects they’re working on this summer.

2021 Year in Review

2021 Year in Review

2021 was a big year for PSC. This wrap-up includes some favorite stories from the year that highlight our people and the research we’ve been fueling.

Getting to Know Ivan Cao-Berg

Getting to Know Ivan Cao-Berg

For some people starting a new job in the middle of a pandemic would be a disheartening experience---not seeing or meeting any of your coworkers except via Zoom could be lonely and a bit depressing. But not so for Ivan Cao-Berg who hit the ground running on his first...

PSC PEARC21 Preview

Meet the Interns

This year we hired three summer interns from from a pool of over 100 applicants! Meet them and find out what projects they’re working on this summer.

Curtis Meyer, Michael J. Becich Named Interim Co-directors of PSC

Building Bridges: Take Two

For PSC’s most recent system install, the team took a collaborative & strategic approach, enabled – not hindered – by COVID-19.

Bridges HPC System Retires After Five Super Years

Bridges HPC System Retires After Five Super Years

PSC’s Big Data and AI Supercomputer Replaced by New Bridges-2 Platform

From the vastness of neutron-star collisions to the raw power of incoming tsunamis to the tiny, life-and-death details of how COVID-19 progresses, the Bridges platform at the Pittsburgh Supercomputing Center (PSC) has seen it all. Now Bridges has taken its final bow, ceding the title of PSC’s flagship high performance computing (HPC) system to the larger, more advanced Bridges-2.

File Compression

The main advantages of file compression are reductions in storage space, data transmission time, and communication bandwidth. This can result in significant cost savings. Compressed files may require significantly less storage capacity than uncompressed files, meaning...

Star Crash

Bridges Powers Artificial Intelligence that Can Speed Simulations of Neutron Star Mergers and Repeated Simulations that Predict Unique Signal from Unequal Mergers

PSC COVID-19 Update: June 15, 2020

PSC COVID-19 Update: June 15, 2020

Anton 2 Simulates Coronavirus Binding to Human Cells A team at the University of Arkansas is using the unparalleled ability of the Anton 2 supercomputer to simulate molecular systems for microseconds or longer to better understand how the Coronavirus that causes...

PSC Bids Farewell to Rich Brueckner

Saying Goodbye to Our Friend   We at PSC are deeply saddened by the passing of Rich Brueckner, leader of insideHPC. For many years, Rich drew on his industry-wide insights to communicate the impact of our field, its companies, and its contributors. Rich’s...

PSC COVID-19 Update: May 21, 2020

  Bridges-Powered Experimental Test for Coronavirus Reveals Viral Changes, Host Responses A new experimental test to identify the SARS-CoV-2 virus from genetic material is being developed by an international team led by Weill Cornell Medicine scientists. Their new...

Making Data Lemonade

COVID-19 Pandemic, Isolation an Opportunity for Pittsburgh-Area High Schoolers to Learn Data Science It begins with a data-driven discussion of the national plan to reopen safely. Brian Macdonald, director of data science at a leading healthcare data analysis company,...

PSC COVID-19 Update: April 27, 2020

Anton 2 Molecular Simulation Supercomputer at PSC Available for Urgent COVID-19 Research A specialized Anton 2 supercomputer, developed by D. E. Shaw Research and hosted at PSC, is now available for urgent research with the potential to impact the national COVID-19...

PSC COVID-19 Update: April 13, 2020

University of Virginia Simulating COVID-19 Interventions on Bridges Researchers at the Biocomplexity Institute, University of Virginia, are working closely with PSC to perform highly detailed epidemiological studies of COVID-19 in support of U.S. federal agencies’...

PSC COVID-19 Update: April 1, 2020

PSC Provides Researchers Access to China’s National Genomics Data Center COVID-19 Database Working with collaborators at Weill Cornell Medicine, PSC is currently hosting the COVID-19 database for the National Genomics Data Center of the Chinese People’s Republic. By...

Non Identical Twins

Nonidentical Twins Anton 2 Simulations Show Curious Difference in Action of Paired Neurotransmitters The NMDA receptor protein underlies memory formation. It’s also an important target of drugs for conditions as different as depression, Alzheimer’s disease and...

Picking up the Beat

  Picking Up the Beat Anton 2 Helps Identify Unexpected Pathway for Irregular-Heartbeat Drugs Irregular heartbeat—arrhythmia—causes a lot of sickness and death in the U.S. Some medications can treat arrhythmia, but they carry potentially serious side effects....

Microscopic and Huge

Microscopic—and Huge Bridges Powers Visualization of Whole Viruses at Atomic Level An image can help human beings make connections. That’s why a scientist from Catholic University of America is using the large-memory nodes of PSC’s Bridges platform to put together...

Freedom They Printed

Woodblock of an early printing press of the type used to create the Aeropagitica. By Jost Amman -Meggs, Philip B. A History of Graphic Design. John Wiley & Sons, Inc. 1998. (p 64), Public Domain, https://commons.wikimedia.org/w/index.php?curid=2777036 Freedom,...

Galactic Choice

A Galactic Choice Artificial Intelligence Running on Bridges Surpasses Humans at Classifying Galaxies New telescope surveys are discovering hundreds of millions of new galaxies—far more than humans can classify. A National Center for Supercomputing Applications...

Big Waves Happen

Tsunami. Photo by George Despiris from Pexels. Big Waves Happen Here, Too Bridges Simulations Chart Out Worst-Case Tsunami Scenarios for U.S. East Coast Recent tsunamis have killed hundreds of thousands and done vast economic damage. But even areas not known for big...

Looking a Hominid in the Mouth

Chimpanzee maxilla (upper jaw bone). Looking a Hominid in the Mouth Chimpanzee “Oral Microbiome” Shows Surprising Frequency of Species Linked to Human Disease Oral health may have a surprising impact on overall health. But scientists still don’t fully understand which...

PSC Recognized for 10th Year in HPCwire Awards

16th Annual HPCwire Awards Given to Leaders in the Global HPC Community Nov. 18, 2019 For the 10th year, PSC has been recognized in the annual HPCwire Readers’ and Editors’ Choice Awards. HPCwire, the leading trade publication in the high performance computing...

AI on Bridges Overcomes Top Pros in Multi-Player Poker

July 16, 2019 Artificial intelligence (AI) research took a big step forward when a CMU AI program overcame the world’s best professional players in a series of six-player poker games. Developed at the Carnegie Mellon School of Computer Science, the Pluribus program...

NSF Funds Bridges-2 Supercomputer at PSC

$10-Million System Will Expand National Capacity for Coupled HPC, AI and Data and Serve Nontraditional and Traditional high performance-Computing Communities July 9, 2019 A $10-million grant from the National Science Foundation (NSF) is funding a new supercomputer at...

AI on Bridges Improves Severe Weather Prediction

Machine Learning Enables Scientists to Spot "Comma-Shaped Clouds" July 2, 2019 Meteorologists can get time-critical help in spotting dangerous cloud formations using artificial intelligence (AI), according to scientists at Penn State and AccuWeather Inc. The team...

CMU Conference Convened for AI and Data

July 1, 2019 In May, 150 researchers, librarians, scientists, computer scientists and industry professionals from 10 countries and dozens of organizations convened at Carnegie Mellon University for the 2019 Artificial Intelligence and Data Reuse (AIDR) Conference. The...

PSC Hosts West Virginia University Supercomputer

April 2, 2019 West Virginia University (WVU), in partnership with the Pittsburgh Supercomputing Center (PSC), has announced the creation of one of the state’s most powerful computer clusters to help power research and innovation statewide. The Thorny Flat high...

Spring 2019: PSC News in Brief

PSC Supplies Computation to Large Hadron Collider Group PSC is supplying computation for the world’s most powerful particle collider. Fermi National Accelerator Laboratory (Fermilab) scientists working on the Compact Muon Solenoid (CMS) experiment, in collaboration...

Nystrom Named PSC Chief Scientist

Will Serve as Principal Scientific and Technical Adviser to PSC Director March 14, 2019 Nicholas Nystrom has been named chief scientist of the Pittsburgh Supercomputing Center (PSC). In this newly created position, Nystrom will serve as the principal scientific...

Alan D. George Named Interim Director of PSC

Feb. 27, 2019 Alan D. George, PhD, the Ruth and Howard Mickle Endowed Chair of Electrical and Computer Engineering and department chair and professor of electrical and computer engineering at the University of Pittsburgh’s Swanson School of Engineering, has...

AIDR 2019 Begins May 13

May 13-15, 2019 Supported by the NSF scientific data reuse initiative, AIDR (Artificial Intelligence for Data Discovery and Reuse) 2019 is a conference aiming to find innovative solutions to accelerate the dissemination and reuse of scientific data in the data...

PSC Receives Best-Ever Six 2018 HPCwire Awards

PSC Receives Best-Ever Six 2018 HPCwire Awards Awards Recognize Leaders in the Global high performance Computing (HPC) Community Nov. 13, 2018 The Pittsburgh Supercomputing Center (PSC) has topped its best-ever performance of last year by receiving six 2018 HPCwire...

DGX-2 Arrives at PSC

Last month, PSC received an NVIDIA DGX-2, the world’s most powerful deep learning system for the most complex challenges. The DGX-2 is the first 2 petaFLOPS system that combines 16 fully interconnected GPUs for 10X the deep learning performance. These photos show,...

PSC Arm of Genome Analysis Center Awarded NSF Funding

National Science Foundation Grant renewal will support expansion of programs supporting genome biology research Oct. 15, 2018 The Pittsburgh Supercomputing Center (PSC) has received $289,203 in National Science Foundation (NSF) funding for its work as part of the...

NSF Funds AI Upgrade for Bridges

NSF Funds Artificial Intelligence Upgrade for Bridges National Science Foundation Awards $1.8-Million for Upgrade to Expand Bridges’ “Deep Learning” Capabilities Sept. 24, 2018 PSC’s Bridges supercomputer is being upgraded to provide the world’s most powerful AI...

PSC Part of New NSF-Funded Cybersecurity Group

$4.9 Million Grant Will Protect U.S. Scientific Workflow Aug. 29, 2018 PSC will be a collaborating institution in a $4.9-million cybersecurity award from the National Science Foundation. The grant will fund a new center focused on protecting and securing U.S....

PSC’s Bridges Supercomputer Extended by NSF

National Science Foundation Awards $1.9 million for Extra Year of Operational Funding Aug. 27, 2018 PSC’s groundbreaking Bridges supercomputer will provide value to the research community for an additional year, extending operations through November 2020, thanks to...

PSC Role in IceCube Cosmic-Ray Neutrino Detection

July 12, 2018 Four billion years ago, the incredible energy of a massive black hole at the center of a distant galaxy—a blazar—created a cosmic ray particle. As part of that process, it also formed a high-energy neutrino and a shower of gamma rays. In September, the...

Spring 2018: PSC News in Brief

CMU Group Describes “Superhuman” Poker AI in Science In a paper published online in December 2017 by the journal Science, Tuomas Sandholm of the CMU School of Computer Science and Noam Brown, a PhD student working with him, detailed how their artificial intelligence...

PSC Launches AI & Big Data Group

April 6, 2018  PSC has a strong history enabling artificial intelligence (AI) research at scale. AI advancements at PSC include Never Ending Language Learning (NELL), led by CMU’s Tom Mitchell and William Cohen, on PSC’s Blacklight system and the 2017...

PSC Launches Computational Biology Group

April 6, 2018 To unify its research efforts and strategic planning in computational biology and public health, PSC has launched a new Computational Biology Group. The senior director of the new group, Phil Blood, will oversee PSC’s Biomedical Applications and Public...

CMU Group Uses Bridges to Find Cause in Brain Activity

Finding Cause CMU Group Uses PSC’s Bridges to Nail Down Cause in Brain-Region Activity April 3, 2018 Why It’s Important: At first blush, fMRI seems magical. Doctors can put a person in an fMRI scanner and watch their brain work as they think, perform simple mental...

Bridges Studies Break-up of Atmospheric Chemicals

You Break it, You Understand It PSC, XSEDE Help Quantum Chemists Understand Break-up of Atmospheric Chemicals March 6, 2018 Why It’s Important: Hydrazine and samarium are two chemicals with little in common, other than that humans sometimes introduce them into the...

Levine, Roskies Day in Pittsburgh, Allegheny County

Michael Levine and Ralph Roskies Day Proclaimed in Pittsburgh and Allegheny County Parallel State Proclamations Also Recognize PSC Founders' Legacy of Service and Discovery Feb. 16, 2018 By proclamation of the mayor and the county executive, today is Michael Levine...

PSC, XSEDE Enable Very High Resolution Brain Imaging

MEG-derived results from a CamCAN volunteer are superimposed on MRI images. The images from left to right move upward through the brain. Activity in the right inferior parietal cortex (yellow markers) is higher (red) than that in the adjacent white matter rim (blue),...

“Superhuman” Poker AI Paper in Science

CMU Group Describes "Superhuman" Poker AI in Science Libratus Used PSC's Bridges to Formulate Its Strategy in Contest with Best Human Players Dec. 18, 2017 In a paper published online yesterday by the journal Science, Tuomas Sandholm, CMU professor of computer...

Bridges Optimizes Doctor Visits for Kidney Patients

Finding the Balance Pitt Researchers Use Bridges to Optimize Doctor Visits for Kidney Patients The biggest causes of death in developed countries—heart disease, cancer, chronic organ failure—are complex conditions that may be best treated by long-term management...

CMU, PSC, Pitt Building Brain Data Repository

CMU, PSC and Pitt to Build Brain Data Repository $5M Grant from the National Institutes of Health Will Help Promote Open Data in Neuroscience Dec. 7, 2017 Researchers with Carnegie Mellon’s Molecular Biosensor and Imaging Center (MBIC), the Pittsburgh Supercomputing...

PSC-Led Flu Vaccine Research Wins International Award

PSC-Led Flu Vaccine Research Wins International Supercomputing Award Nov. 14, 2017 Research on the best strategies for offering flu vaccinations to the public at PSC, the University of Pittsburgh and Soongsil University in the Republic of Korea has won a 2017...

PSC Wins Record Five HPCwire Awards

PSC Wins a Record Five HPCwire Readers’, Editors’ Choice Awards Annual Awards Recognize Leaders in the Global high performance-Computing Community Nov. 13, 2017 PSC has been recognized with a best-year-ever five HPCwire Readers’ and Editors’ Choice Awards at the...

Fall 2017: PSC News in Brief

PSC Interns Advance AI, Cybersecurity, System Administration Bridges-Powered Research Wins PEARC17 Award Early Successes on Anton 2 WVU awarded $1 million grant from NSF for new HPC cluster at PSCHPC cluster at PSC PSC Interns Advance AI,...

The Future is Stem

The Future is STEM High School Students Use Bridges as Intro to Supercomputing The future of employment is increasinglySTEM-related. To prepare its students for higher-paying, computationally savvy jobs in science and industry, the North Carolina School...

Inner Space

Inner Space Anton Simulations Uncover Importance of Empty Space for Protein Function Experiments can detect chemical changes on a scale as short as about a thousandth of a second. Most supercomputers can only simulate complex biomolecules for as long as a...

Blue Acres

PSC, XSEDE Support Gene Assembly of Key Aquaculture Species Commercial abalone “aquaculture”—farming the shellfish in enclosures—has exploded over the past decade, becoming a $100-million global industry. Understanding the DNA of the abalone is key to improving and...

Synergistic Voyage

Synergistic Voyage ECSS Collaboration Speeds, Expands Microrobotic Simulations Since the science fiction novel Fantastic Voyage—and before—people have been fascinated with the idea of shrinking our tools so that we could carry out miniature tasks with...

A Picture is Worth a Thousand Dollars?

A Picture is Worth a Thousand Dollars? CMU B School Researchers Use Bridges to Unpack How Photos Help Sell Property It’s not hard to believe that when you advertise a property, a good picture will help you sell or rent it. What isn’t so clear is what factors make for...

From the Director-Fall17

FROM THE DIRECTOR Welcome to the second issue of PSC Science Highlights.  I’m honored to follow in the footsteps of Michael Levine and Ralph Roskies, whose vision created PSC and then sustained it for more than three decades. Through their leadership and with the...

PSC to Host WVU Cluster

PSC to Host WVU Cluster Oct. 10, 2017 A three-year National Science Foundation grant totaling nearly $1 million will let West Virginia University (WVU) develop its next-generation high performance computing cluster to advance research in an array of fields, from drug...

Congratulations to IEEE President-Elect

Congratulations to IEEE President-Elect José Moura   IEEE members elected Jose M. F. Moura as 2018 IEEE President-Elect https://www.ieee.org/about/corporate/election/index.html

PSC Interns Advance High Performance Computing

Summer’s Up PSC Interns Advance AI, Cybersecurity, Computer Administration Sept. 1, 2017 On two dates in July and August 2017, PSC’s summer interns—a central part of the center’s educational mission—reported the results of their projects to the PSC staff. The...

Choice Works

Choice Works PSC Models Show Value of Vaccine Choice in Fighting Flu Less than half of children and adults under age 65 get vaccinated for influenza. Researchers at PSC, the University of Pittsburgh and Soongsil University in the Republic of Korea used PSC...

Brain Function—What’s Next?

Brain Function—What's Next? A Conversation with David Hildebrand, Harvard University Aug. 17, 2017 The May 10, 2017, issue of the prestigious journal Nature featured an article by researchers at Harvard University and PSC that charted out the first “nano-scale”...

The Best Thing Since Sliced Bread?

The Best Thing Since Sliced Bread Zebrafish Study Reveals First Fine Structure of a Complete Vertebrate Brain. Despite decades of stunning advances in imaging the brain and measuring its activity, we still don’t understand how even a simple vertebrate brain...

Video: Cancer DNA Changes

Identifying Cancer DNA Changes with XSEDE/PSC Resources The scientific field of bioinformatics has for the past five years relied on increasingly larger data sets for new and innovative research. With few in the field trained in computer science, many groups, like the...

Bridging Students to STEM Skills

Bridging Students to STEM Skills “Tell me and I forget.  Teach me and I remember.  Involve me and I learn.” — Benjamin Franklin The future of employment is increasingly STEM-related. To prepare its students for higher-paying, computationally savvy jobs in...

PSC, XSEDE Support Gene Assembly of Key Aquaculture Species

Blue Acres? PSC, XSEDE Support Gene Assembly of Key Aquaculture Species May 2, 2017 Why It’s Important: Commercial abalone “aquaculture”—farming the shellfish in enclosures—has exploded over the past decade, becoming a $100-million global industry. Red abalone, a...

Heat Stable Vaccines Could Save Lives, Money

Heat Stable Vaccines Could Save Lives, Money April 26, 2017 Health care workers in low-income nations often have to deliver vaccines on rugged footpaths, via motorcycle or over river crossings. On top of this, vaccines need to be kept refrigerated or they may degrade...

From the Directors

From the Directors Welcome to the new PSC Science Highlights! This first issue of our new format highlights a number of success stories in our ongoing mission to enable and support computationally dependent research in traditional and emerging fields, including...

Anton 2 Operational

Anton 2, a specialized supercomputer developed by D. E. Shaw Research that simulates the motions of biomolecules, has replaced the original Anton 1 system previously at PSC. The new machine, operationally supported through a grant from the National Institutes of Health, enables life scientists to simulate much larger biomolecules for longer timescales than was previously feasible.

BRIDGES PHASE 2

The National Science Foundation has approved the Phase 2 upgrade of the new Bridges supercomputer it funded at PSC. The enhanced system offers more speed, memory and data storage for investigators who have used supercomputers and those in fields that never before needed them.

GUT CHECK

GUT CHECK While diabetes poses many life- and limb-threatening problems, it also causes serious changes and problems in the digestive tract. A study using PSC’s Bridges system sifted through the DNA of thousands of microbe species in healthy and diabetic intestines to...

PSC Symposium: Public Health

PSC Public Health Symposium April 21, 2017 - 1pm 300 S Craig St, Pittsburgh PA   April's PSC Symposium Series focuses on Public Health Applications. The program will include an overview of the Public Applications team with research presentations to follow....

No Telling

Artificial intelligence (AI) has reached a new level, with an AI poker program beating four of the top specialists in “heads-up, no-limit Texas hold’em” poker. “Libratus,” powered by PSC’s Bridges supercomputer, is a first step in AIs that can handle “imperfect...

PSC in Brief

PSC in Brief PSC Projects Earn 2016 HPCwire Awards Intensive Approach May Help Diversify Bioinformatics Making Big Data DANCE(S) Galaxy Gateway Offers Transparent Access to PSC's Bridges   PSC Projects Earn 2016 HPCwire Awards Two PSC projects were cited in the...

More Power To Us

MORE POWER TO US If everyone used electricity at a constant rate, generating power would be simple. But spikes in use lead to under-utilized power and ultimately increased costs. Scientists used PSC’s Bridges and former Greenfield systems to understand the economic...

Hooked Up

HOOKED UP A common way for proteins to hold themselves together is with disulfide bridges. But scientists don’t completely understand why some proteins need them to “hook up” their structure. Researchers used the DESRES Anton system hosted at PSC to discover the...

Bridges Supporting Galaxy RNA Assemblies

Users Can Run Trinity RNA-Seq Assembly Jobs on XSEDE from Galaxy Main Researchers preparing de novo transcriptome assemblies via the popular Galaxy platform for data-intensive analysis now have transparent access to a premier HPC resource ideal for rapid assembly of...

Bridges-Powered AI Defeats Human Poker Experts

PSC System Powers Libratus, and More Jan. 31, 2017 Watch the press conference at the Rivers Casino. In the “Brains vs. AI” competition at the Rivers Casino in Pittsburgh, a CMU School of Computer Science artificial intelligence program—“AI”—called Libratus beat four...

Bridges Supercomputer Completed

Upgrade of PSC’s Big Data System Now in Production Jan. 9, 2017 The Phase 2 Upgrade of the Bridges supercomputer at the Pittsburgh Supercomputing Center (PSC) has been approved by the National Science Foundation (NSF), which funded the project. The approval makes new...

PSC Systems Model Economics of Electric Power Storage

More Power to Us Greenfield, Bridges Models Pinpoint Inefficiencies in Electric Power Storage Why It’s Important: If everyone used electricity at a constant rate, generating power would be simple. Generators that supply a fixed level of energy would be fairly cheap to...

Poker Pros Face Artificial Intelligence

Upping The Ante: Top Poker Pros Face Off With Artificial Intelligence 20-Day Contest at Rivers Casino in Pittsburgh Begins Jan. 11 Jan. 4, 2017 Four of the world’s best professional poker players will match wits with an artificial intelligence developed by Carnegie...

Bridges, Brain Reconstruction Win HPCwire Awards

PSC Bridges and Brain Reconstruction Project Earn 2016 HPCwire Awards Annual Awards Bestowed on Leaders in the Global High-Performance Computing Community Nov. 14, 2016 The Pittsburgh Supercomputing Center (PSC) has received two international...

Fall 2015: From the Directors

Welcome to the Fall 2015 edition of People. Science. Collaboration.  This summer we marked a significant transition at PSC: We retired the Blacklight system, and in October will begin constructing the new, National Science Foundation (NSF)-funded Bridges system...

N.C. High School to Use Bridges

N.C. High School to Use Bridges for Computational Chemistry Projects Sept. 27, 2016 The North Carolina School of Science and Mathematics (NCSSM), a public high school for academically talented juniors and seniors from across the state, has received an allocation on...

Bridges Reveals Diabetes, Gut Microbe Links

Gut Check Bridges Reveals Interaction between Diabetes and Digestive-Tract Microbes Sept. 7, 2016 Why It's Important: Many people appreciate how serious diabetes is: it can cause blindness, nerve pain and lack of circulation in the limbs that leads to amputation, to...

Bridges Links Biologists to Wild Genomes

Wild Things Bridges Connects Evolutionary Biologists with Genomes of Wild Species July 13, 2016 Why the Sumatran Rhinoceros Is Important Depressing but true: things don’t look good for the Sumatran rhinoceros. This unique tropical species is all but extinct in the...

2016: Island Time

Island Time Extended Simulation on Anton Shows How Cell-Surface Molecules Cluster Why It's Important: Virtually every process in human health and disease relies on signals getting across cell membranes—the flexible “bags” that enclose the contents of...

Early Effects Glucocorticoids

Early Effects Pitt Group Uses PSC, XSEDE Resources to Learn Effects of Glucocorticoids on Embryonic Nerve Cells April 7, 2016 Why It’s Important   Glucocorticoids have been a healing tool for treating allergies, asthma, autoimmune diseases and even some...

Fall 2015: Bridge to the Future

BRIDGE TO THE FUTURE Bridges Will Bring high performance Computing and Data Analysis to New Fields In 2016, PSC’s newest supercomputer, Bridges, will go online. The $9.65-million, NSF-funded Bridges represents the culmination of lessons learned from PSC’s Blacklight...

Fall 2015: News in Brief

News in Brief DXC EXPANDS SCOPE  PSC’s Data Exacell (DXC) pilot project has increased the community of researchers who can use the system and the scope of projects it can serve by adding new hardware and software resources. The DXC team added data storage to the...

Fall 2015: Securing the CHAIN

SECURING THE CHAIN WITH TRINITY Shrimp Transcriptome Offers Secure Future Food Source, Better Understanding of Ocean Food Chain WHY IT'S IMPORTANT Litopenaeus vannamei, the whiteleg shrimp, is the number one human food source from the sea. Over a million tons are...

Fall 2015: A Shift in Perspective

A Shift in Perspective Anton Simulations Upend Picture of How Proteins Work  The Anton simulations suggest that PKA has nine distinct communities (A through H). The size of the circles shows how big each community is physically, the width of the lines connecting...

Fall 2015: PSC Impact on PA

PSC's Impact on Pennsylvania PSC provides a significant economic benefit to the Commonwealth of Pennsylvania. In addition to supporting research, education and business activities throughout the Commonwealth, PSC consistently returns many times the state’s investment...

Fall 2015: Understanding Choice

Understanding CHOICE WHY IT’S IMPORTANT  Understanding how human beings make decisions is critical in fields like cybersecurity, public health, elections and governance, and economics. How often do people make rational choices, weighing all the options? How often...

Fall 2015: Life is Not Chess

LIFE is NOT Chess COUNTED AS A LOSS OR A “STATISTICAL TIE,” POKER MATCHUP POINTS TO BETTER DECISION MAKING Life is not a chess game.  The world is not a chessboard, with every piece visible. Life is more like a hand of poker, according to Tuomas Sandholm of...

Spring 2015: PSC News in Brief

DATA EXACELL MARKS FIRST YEAR WITH USER-DRIVEN ADVANCES User input and experience have helped PSC’s Data Exacell (DXC) complete a successful first year of operation. Thanks to the ongoing dialog with users, the DXC team has advanced the system’s software and gained a...

Spring 2015: All Flesh is Grass?

ALL Flesh is Grass? Blacklight Helps Researchers Untangle Genome of Wheat Progenitor Wheat, a species of grass, provides more protein for human consumption—more flesh—than any other plant. Globally, we harvest 725 million metric tons of...

Spring 2015: Putting Tools

Putting Tools in the Right Hands PSC Workshops Transform Public Health in East Africa   In a series of workshops sponsored by the Mozambique Ministry of Health, PSC’s Public Health Applications Group and their colleagues at the Johns Hopkins School...

Spring 2015: Teaching the Machine to See

Teaching the Machine to See Blacklight "Trains" Video Search System for Competition Victory A good example that we live in the era of Big Data is that, as we’ve moved from super-8-film home movies to ever-present smartphones, we’ve all begun to...

Spring 2015: Bridging the Gap

Bridging the GAP Bridges Will Bring high performance Computing and Data Analysis Capabilities to New Fields  Today, investigators in important, data-intensive fields such as cancer genomics, the digital humanities and machine learning...

Spring 2015: Janus Channel

Janus Channel Anton Simulations Reveal How Pain, Epilepsy Drugs Work through Same Target Protein If you tried to imagine two neurological conditions as different from each other as possible, epilepsy and non-headache pain would be a good choice....

Spring 2015: FutureMatch

FutureMatch: Enabling Better Organ Exchange Programs  Over 123,000 adults and children currently await organ transplants. Unfortunately, only about 30,000 donor organs become available each year. Every day, roughly 20 people die waiting...

Spring 2015: Lifeboat Africa

Lifeboat Africa Blacklight Helps Archeologists Study the Origins of Modern Human Behavior Picture an endangered species. Climate change has forced it into a small refuge. The population has crashed to thousands or fewer. Survival is by no...

Thinking Big Data

$7.6-Million NSF Grant to fund the Data Exacell, PSC’s Next-Generation System for Storing, Analyzing Big Data     The term “Big Data” has become a buzzword. Like any buzzword, its definition is fairly malleable, carrying different meanings in research,...

News in Brief: PSC and its Partners

PSC RECEIVES FOUR NATIONAL AWARDS   In November, PSC received top national honors in four categories of the 2013 HPCwire Readers’ and Editors’ Choice Awards. HPCwire, the premier trade publication for the high performance computing (HPC) community, announced the...

Two Steps Forward, One Step Back

Anton shows how water leaving, re-entering potassium channel structure delays return to active state   WHY IT’S IMPORTANT The potassium channel helps create electrical signals in nerve and muscle cells. This process goes awry in some irregular heartbeat...

So You Want to be a Super Computor

PSC Takes Lead in XSEDE Summer Research Experience Program     Young career seekers in the high performance computing (HPC) field often face a familiar problem. You can’t get the job without experience. But another hitch confronts would-be “super computors”...

Roll Out the Beta Barrels

Anton Simulations Reveal How Dangerous Bacteria Install Critical Proteins   Why It’s Important   In an era of diminishing antibiotic effectiveness, it’s no wonder that bacteria, how they live—and what molecular components they can’t live without—are an...

Building a 21st Century Data Highway

PSC Advanced Networking Group Expands Networking Capabilities for Region, World   In the era of “Big Data,” the challenge of moving the vastly expanded data volumes created and needed by today’s researchers has become central. The old network—the equivalent of an...

Shoring up the Weakest Link

PSC Cybersecurity Group Uses Technology, User Savvy,to Guard Supercomputing Resources Nationwide     Luckily, the woman was smart. When a waiter brought her a phone, saying her credit card company was calling her, she smelled a rat. The caller, claiming to...

Cosmic Tug of War

Large Dark Matter Halos Favor Growth of Larger Early Galaxies Nov. 20, 2015 WHY IT’S IMPORTANT Few scientific questions are as fundamental, or fascinating, as the origin of the Universe. And we can see the early Universe. The farthest galaxies from us are so far away...