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Voltage-sensing Protein Moves in Unexpected Ways in Anton Simulations

Voltage-sensing Protein Moves in Unexpected Ways in Anton Simulations

by Ken Chiacchia | Jun 3, 2024 | Anton 2, Research, Science Highlights

This image shows the complexity of simulating the functional movements of the voltage-sensitive phosphatase’s motions. Anton 2 enables scientists to reproduce the movements of the protein’s components, as well as the lipids (grey, with the headgroups colored), water...
Representation Matters in AI-Generated Images

Representation Matters in AI-Generated Images

by Ken Chiacchia | May 24, 2024 | AI, Bridges-2, Science Highlights

A prompt for Mexican dancers from an AI image generator produced the strange ballerinas at left; a new CMU-designed filter makes the image more appropriate and realistic, right. Image credit: Zhixuan Liu, Jean Oh, et al. 2024. SCoFT: Self-Contrastive Fine-Tuning for...
Bridges-2 Simulations Target Role of Red Blood Cells in Clot Formation

Bridges-2 Simulations Target Role of Red Blood Cells in Clot Formation

by Ken Chiacchia | May 2, 2024 | Bridges-2, Science Highlights

Developing blood clot, with fibrin “cables” (yellow), being pulled together by platelets (off-white). Clots that trap more red blood cells (red) may not contract as effectively, slowing healing. Adobe Stock image: 240_F_453411695_2N2Jddctb1vWwqowio9hVtKoNrZ76X65.jpg...
Surface Curvature Directs Growth of Bacterial Biofilms

Surface Curvature Directs Growth of Bacterial Biofilms

by Ken Chiacchia | Mar 26, 2024 | Bridges-2, Science Highlights

Simulated bacteria growing on a flat surface (left) versus on a sphere (right). The simulation recreates the growth of real bacteria raised in the lab; it also shows that when the microbes grow on progressively smaller curved surfaces, the areas of alignment become...
Bridges-2 Powers Snake-Virus Genome Analysis

Bridges-2 Powers Snake-Virus Genome Analysis

by Ken Chiacchia | Mar 13, 2024 | Bridges-2, Science Highlights

By Kimberly Mann Bruch and Advay Shindikar, San Diego Supercomputer Center, and Ken Chiacchia, PSC Red-tailed boa. The species is classified as “vulnerable;” scientists would like to see it protected. A study of a devastating virus that affects it is providing clues...
Human-AI Knowledge Sharing for Water Treatment Plants Operation

Human-AI Knowledge Sharing for Water Treatment Plants Operation

by Ken Chiacchia | Feb 28, 2024 | AI, Bridges-2, Science Highlights

Adobe stock image: https://www.psc.edu/wp-content/uploads/2024/02/AdobeStock_646474337-scaled.jpeg CMU Group Uses Bridges-2 to Create Virtual Plant to Learn from Veteran Engineers, and Next Train and Work with Rookies The people who keep our drinking water safe are...
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