STAR-Fusion uses the STAR aligner to identify candidate fusion transcripts supported by Illumina reads and maps junction reads and spanning reads to a reference annotation set.




To see what versions of STAR-fusion are available type

module avail star-fusion

To see what other modules are needed, what commands are available and how to get additional help type

module help  star-fusion

To use STAR-Fusion, include a command like this in your batch script or interactive session to load the star-fusion module:

module load star-fusion


Be sure you also load any other modules needed, as listed by the module help star-fusion command.




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