ProbCons

 

ProbCons is tool for the probabilistic consistency-based multiple alignment of amino acid sequences.

Documentation

Do, C.B., Mahabhashyam, M.S.P., Brudno, M., and Batzoglou, S. 2005. PROBCONS: Probabilistic Consistency-based Multiple Sequence Alignment. Genome Research 15: 330-340.

 

 

Usage

To see what versions of ProbCons are available type

module avail probcons

To see what other modules are needed, what commands are available and how to get additional help type

module help probcons

To use ProbCons, include a command like this in your batch script or interactive session to load the probcons module:

module load probcons

Be sure you also load any other modules needed, as listed by the module help probcons command.